Description of printError

DESCRIPTION

 printError : displays message from a catch statement with hyperlinks.

 Copyright (C) 2016 Wiggins Lab 
 Written by Stella Stylianidou.
 University of Washington, 2016
 This file is part of SuperSegger.
 
 SuperSegger is free software: you can redistribute it and/or modify
 it under the terms of the GNU General Public License as published by
 the Free Software Foundation, either version 3 of the License, or
 (at your option) any later version.
 
 SuperSegger is distributed in the hope that it will be useful,
 but WITHOUT ANY WARRANTY; without even the implied warranty of
 MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 GNU General Public License for more details.
 
 You should have received a copy of the GNU General Public License
 along with SuperSegger.  If not, see <http://www.gnu.org/licenses/>.

CROSS-REFERENCE INFORMATION

intAlignIm intAlignIm : aligning image A to image B with given precision

trackOptiCellFiles trackOptiCellFiles : organizes the data into the final cell files that

trackOptiClist trackOptiClist : generates an array called the clist

trackOptiMakeCell trackOptiMakeCell : generates the CellA field indexed by the region number

deleteRegions deleteRegions : deletes regions in list_c from mask in data.

trackOpti trackOpti : calls the rest of the functions for segmentation

cellprops3 cellprops3 : Calculates the shape properties of the region or 'cell'.

cellprops5 cellprops5 : Calculates the shape properties of a region or 'cell'.

regionOpti regionOpti : Segmentaion optimization using region characteristics.

killRegionsGUI killRegionsGUI : used to remove regions from an image.

makeBadRegions makeBadRegions : creates bad regions to train the software on region shape

makeTrainingData makeTrainingData : user can click on segments or regions to change score

updateTrainingImage updateTrainingImage : user can click on segments or regions to change score

makeFrameMosaic makeFrameMosaic: Creates a tower for a single cell.

makeKymographC makeKymographC : creates a kymograph for given cell data file..

showSeggerImage showSeggerImage : produces the superSeggerViewer image according to clist and

superSeggerViewer superSeggerViewer : interactive visulization of the segmented data.

superSeggerViewerGui superSeggerViewerGui : gui used to visualize the results of segmentation

towerMergeImages towerMergeImages : merges the towers of several cells.

SOURCE CODE

0001 function [] = printError( ME )
0002 % printError : displays message from a catch statement with hyperlinks.
0003 %
0004 % Copyright (C) 2016 Wiggins Lab
0005 % Written by Stella Stylianidou.
0006 % University of Washington, 2016
0007 % This file is part of SuperSegger.
0008 %
0009 % SuperSegger is free software: you can redistribute it and/or modify
0010 % it under the terms of the GNU General Public License as published by
0011 % the Free Software Foundation, either version 3 of the License, or
0012 % (at your option) any later version.
0013 %
0014 % SuperSegger is distributed in the hope that it will be useful,
0015 % but WITHOUT ANY WARRANTY; without even the implied warranty of
0016 % MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
0017 % GNU General Public License for more details.
0018 %
0019 % You should have received a copy of the GNU General Public License
0020 % along with SuperSegger.  If not, see <http://www.gnu.org/licenses/>.
0021 
0022 disp( getReport( ME, 'extended', 'hyperlinks', 'on' )); 
0023 
0024 end
0025

printError

PURPOSE

SYNOPSIS

DESCRIPTION

CROSS-REFERENCE INFORMATION

SOURCE CODE