Home > SuperSegger > segmentation > getRegNames3.m

getRegNames3

PURPOSE ^

getRegNames3 : contains the names of the parameters used for scoring regions.

SYNOPSIS ^

function [names,num] = getRegNames3()

DESCRIPTION ^

 getRegNames3 : contains the names of the parameters used for scoring regions.
 The parameters are calculates in cellprops3.m

 Copyright (C) 2016 Wiggins Lab
 Written by Stella Stylianidou
 University of Washington, 2016
 This file is part of SuperSegger.

 SuperSegger is free software: you can redistribute it and/or modify
 it under the terms of the GNU General Public License as published by
 the Free Software Foundation, either version 3 of the License, or
 (at your option) any later version.

 SuperSegger is distributed in the hope that it will be useful,
 but WITHOUT ANY WARRANTY; without even the implied warranty of
 MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 GNU General Public License for more details.

 You should have received a copy of the GNU General Public License
 along with SuperSegger.  If not, see <http://www.gnu.org/licenses/>.

CROSS-REFERENCE INFORMATION ^

This function calls: This function is called by:

SOURCE CODE ^

0001 function [names,num] = getRegNames3()
0002 % getRegNames3 : contains the names of the parameters used for scoring regions.
0003 % The parameters are calculates in cellprops3.m
0004 %
0005 % Copyright (C) 2016 Wiggins Lab
0006 % Written by Stella Stylianidou
0007 % University of Washington, 2016
0008 % This file is part of SuperSegger.
0009 %
0010 % SuperSegger is free software: you can redistribute it and/or modify
0011 % it under the terms of the GNU General Public License as published by
0012 % the Free Software Foundation, either version 3 of the License, or
0013 % (at your option) any later version.
0014 %
0015 % SuperSegger is distributed in the hope that it will be useful,
0016 % but WITHOUT ANY WARRANTY; without even the implied warranty of
0017 % MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
0018 % GNU General Public License for more details.
0019 %
0020 % You should have received a copy of the GNU General Public License
0021 % along with SuperSegger.  If not, see <http://www.gnu.org/licenses/>.
0022 names = { 'long axis: ', ...
0023     'short axis mean: ', ...
0024     'neck width: ', ...
0025     'short axis max: ', ...
0026     'short axis var: ', ...
0027     '<width sin pi s/S >: ', ...
0028     '<width sin pi 2s/S>: ', ...
0029     '<width sin pi 3s/S>: ', ...
0030     'RoundIndOver: ', ...
0031     'RoundIndUnder ', ...
0032     'Area: ', ....
0033     'max dtheta^2: ', ...
0034     '<theta sin pi s/2S >: ', ...
0035     '<theta sin pi s/S  >: ', ...
0036     '<theta sin pi 3s/2S>: ', ...
0037     '<theta sin pi 2s/S >: ', ...
0038     '1/long axis: ', ...
0039     '1/mean short axis: ',...
0040     'Min End Width: ',...
0041     'round end min: ',...
0042     'round end max: '};
0043 
0044     names = names';
0045     num  = 21;
0046 end

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