MakeFileName

 MakeFileName : converts from nameInfo structure to the image filename.

 INPUT : 
       nameInfo : contains information about where numbers are found
 after strings in strD, for more info look at ReadFileName
           npos: [4x4 double]
           strD: {'t'  'c'  'xy'  'z'}
           basename: before first found strD, eg. 'tsyfp-p-'
           suffix: after last found number of strD, eg. '.tif'
 OUTPUT : 
       name : string of format *t*c*xy*z*


 Copyright (C) 2016 Wiggins Lab 
 Written by Paul Wiggins & Stella Stylianidou.
 University of Washington, 2016
 This file is part of SuperSegger.
 
 SuperSegger is free software: you can redistribute it and/or modify
 it under the terms of the GNU General Public License as published by
 the Free Software Foundation, either version 3 of the License, or
 (at your option) any later version.
 
 SuperSegger is distributed in the hope that it will be useful,
 but WITHOUT ANY WARRANTY; without even the implied warranty of
 MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 GNU General Public License for more details.
 
 You should have received a copy of the GNU General Public License
 along with SuperSegger.  If not, see <http://www.gnu.org/licenses/>.

0001 function name = MakeFileName( nameInfo )
0002 % MakeFileName : converts from nameInfo structure to the image filename.
0003 %
0004 % INPUT :
0005 %       nameInfo : contains information about where numbers are found
0006 % after strings in strD, for more info look at ReadFileName
0007 %           npos: [4x4 double]
0008 %           strD: {'t'  'c'  'xy'  'z'}
0009 %           basename: before first found strD, eg. 'tsyfp-p-'
0010 %           suffix: after last found number of strD, eg. '.tif'
0011 % OUTPUT :
0012 %       name : string of format *t*c*xy*z*
0013 %
0014 %
0015 % Copyright (C) 2016 Wiggins Lab
0016 % Written by Paul Wiggins & Stella Stylianidou.
0017 % University of Washington, 2016
0018 % This file is part of SuperSegger.
0019 %
0020 % SuperSegger is free software: you can redistribute it and/or modify
0021 % it under the terms of the GNU General Public License as published by
0022 % the Free Software Foundation, either version 3 of the License, or
0023 % (at your option) any later version.
0024 %
0025 % SuperSegger is distributed in the hope that it will be useful,
0026 % but WITHOUT ANY WARRANTY; without even the implied warranty of
0027 % MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
0028 % GNU General Public License for more details.
0029 %
0030 % You should have received a copy of the GNU General Public License
0031 % along with SuperSegger.  If not, see <http://www.gnu.org/licenses/>.
0032 
0033 
0034 npos = nameInfo.npos;
0035 strD = nameInfo.strD;
0036 basename = nameInfo.basename;
0037 suffix = nameInfo.suffix;
0038 numD = numel(strD);
0039 [tmp,ord] = sort(npos(:,2));
0040 npos_sort = npos( ord, :);
0041 strD_sort = strD(ord);
0042 
0043 name = basename;
0044     for i = 1:numD        
0045         if npos_sort(i,2)
0046             str_tmp = ['%0',num2str(npos_sort(i,4)),'d'];
0047             name = [name, strD_sort{i}, sprintf( str_tmp, npos_sort(i,1))];            
0048         end
0049     end    
0050     name = [name,suffix];
0051 end
0052